Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYTLFEIGPFALDSFGWKETIPPKKDGDSEKVVRMASP--IIVNARFSDPITGVEKLIITNNNGKKDIFESDILTTRNLPSLIKYG--YSINEKYIRSLSYALQLMRDRLPLSELYEGVGILETPFGYLISLDKVLKSIQFNQSSPSYPIVDSAYDLTPKGTFDNWFNMYIDEVKGHLLLELAV-IFGISALVTSFLKHKHEIEFAGILFSFTGQSSTGKSTAAALAVSVAGNPTKGNETLFRSWNATRNALEGYLSNNYG-----------IPIVFDE-------------------LSSTTLRDTTGLLYSIAEGQGRQRSNVHGEVKTPKNWGTSVISTSEYSIFNDSAQNDGLRVR----TIEINE-------------------QFTTNATNA-------DNIKKAVALNYGHVLPLVAKYLINR----------------------EDEVIQWFYKEVDWFEAKLKDE------------------------------TNNTGIRMFKRYAVITTSAKILGRVLSTDIDIANIRDYF-----IDYHTHT--VSERSLADKAIDVIIQFVAQNRGKFSDEGALKNMFENYGLISLKDDHIEVKIIANVFKQMLNNHQFQDVNNVVNALRDKGFILADRGRQTT---------------KRS--------VKDNSGKKQSLVFYHLKLDVEFASILG------------LTKDKSLLQN-------WTPSNDNKAAKELFKSANEG-----IGPS------GVHEDF----------------------------------- |
| 1OE9 Chain:A ((5-794)) | -------------------------ELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLDLEYC--LKELPPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGI--------VLVAINPYEQLPIYG-------------------------EDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDER----NQSIIVSGESGAGKTVSAKYAMRYFAT----VSNVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLLEKSRVVFQAEEERNYHIFYQLCAS-AALPEFKTLRLGNANYFH-YTKQGGSPVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPKHDPLTIFCDL-MGVDYEEMAHWLCHRKLATYIKPISKLHAINARDALAKHIYANLFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPDFYDNQPCINLIEAKMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNK------AFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQKTIRGWLMRKKYMRMRRGD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OE9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -71672 for 3475 contacts (-20.6/contact) +
2D Compatibility (PS) -54253 + (NN) -10255 + (LL) 3180
1D Compatibility (HY) -12400 + (ID) 2950
Total energy: -148350.0 ( -42.69 by residue)
QMean score : 0.216
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