Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---GALTTS---TRQGSRVVGFMDFIIALGWQIIPSNIRYIYILNCSQFMPTSDVTTIYFQADSGLESIFVMDSPFYASCTQQLPDKTIKTYGVTISKKQSIISINFSSSLEPNIMVSAWTASITRTQ--
1F3U Chain:A ((2-119))
AERGELDLTGAKQNTGVWLVKVPKY-LSQQWAKASGRG----EVGKLRIAKTQGRTEVSFTLNEDLAN-------IHDIGGKPASVSAPREHPFVLQSVGGQTLTVFTESSSDKLSLEGIVVQRAECRPA
General information:
TITO was launched using:
RESULT:
Template:
1F3U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37189 for 588 contacts (-63.2/contact) +
2D Compatibility (PS) -11730 + (NN) -4874 + (LL) 1184
1D Compatibility (HY) 800 + (ID) 550
Total energy: -52359.0 ( -89.05 by residue)
QMean score : 0.244
(partial model without unconserved sides chains):
PDB file :
Tito_1F3U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F3U-query.scw
PDB file :
Tito_Scwrl_1F3U.pdb
: