Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTL-NLSVDEVLTTTRSVRKRLDFDKPVPRDVLMECLELALQAPTGSNSQGWQWVFVEDAAKKKAIADVYLANARGYLSGPAPEYP--DGDTRGERMGRVRDS------------------ATYLAE--HMHRAPVLLIPCLKGREDESAVGGVSFWASLFPAVWSFCLALRSRGLGSCWTTLHLLDNGEHKVADVLGIPYDEYSQGGLLPIAYTQGIDFR---PAKRLPAESVTHW-NGW |
3GR3 Chain:A ((5-229)) | ---APIDIFQSILSRKSIRAFT--DQPVTQETIREILKLAARAPSGTNLQPWQVIVLTG-KILQKVGQELSQLVLSGIKGE-REYHYYPRQWREPYLSRRRKVGLDLYKSLGIQKGDQEKMLHQKAKNFLFYGAPVGLLFTIDHDME------MGSWLDLGMFMQTIMLAARGFGLDTCAQAAFA--DYHKQIRSLLSVP-SDRHIICGMALGYRDMNAPENNFETEREPIDNFVHFIKSY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GR3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94813 for 1358 contacts (-69.8/contact) +
2D Compatibility (PS) -21636 + (NN) -9241 + (LL) 1040
1D Compatibility (HY) -7200 + (ID) 2050
Total energy: -133900.0 ( -98.60 by residue)
QMean score : 0.474
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