Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEAALTPAFEEPEAPRASPRSRSTLLKRLADVVCLPSSRINAFERS--MTADLLVEMLRDANVGEREKVARRLAMLNEMPGVLVRLLLRDELPVARALLVDSEKLSDADLISCLYQATTEHRRLIAQRRGVSEVVADALIEVGEPAVIETLLRNELVKLSHQGVENIVAATRDAQHLIPLLLRRAELRPSHAYVMF---WWADSEARRVILQRFAVSREILQDAVGDVFALASAEGWQDPLSRKALQFIERRQR-----NRAAIAKSPFNSLDEAVAAGEGGFNREIAEEISYLSGLKPMTGAKIFTDPGGEPLAILCKATGLPRGCVRQLWRGLRRQEVDRTGATDPNLERVLTVYDAIAVDRAQTVLRYWNWSLTSALTPALLKAIRDGD----EAAVDEYS-APQRAAMLALSRDFGR--------------------------------------- |
| 1EE4 Chain:A ((1-423)) | ----QELPQMTQQL-NSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDAD---AVPLFIQ--LLYTGS--VEVK---EQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPSL-IRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTISNI---------TAGNTEQIQAVIDA-----NLIPPLVKLLEVAEDK----TKKEACWAISNASSGGLQRPDIIRYLVS----QGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQNENDKIYEKAYKIIETYF |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EE4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -61784 for 3175 contacts (-19.5/contact) +
2D Compatibility (PS) -40231 + (NN) -21716 + (LL) 2596
1D Compatibility (HY) -1200 + (ID) 1900
Total energy: -124235.0 ( -39.13 by residue)
QMean score : 0.000
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