Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPQPTSQQRASVASSQSTQGAVGWSAATGWVVLFVAVALVVWFVSLDMRHLVGPDEGRYAEISREMFASGDWVTIRYNALKYFEKPPFHMWVTVVGYELFGLGEWQARLAVALSGLLGIGVSMMAARRWFGARAAAFTGLALLAAPMWSVAAHFNTLDMTLAGVMSCVLAFMLMGQHPDASVAARRGWMVACWAAMGVAILTKGLVGIALPGLVLVVYTLVTRDWGLWRRLHLALGVVVMLVITVPWFYLVSVRNPEFPNFFFIHEHWQRYTSNIHSRSGSVFYFLPLVIGGFLPWAGIFPKLWTAMRAPVEGTQARFRPALMAGIWAIAIFVFFSISRSKLPGYIVPVIPALGILAGVALDRLSPRSWGKQLIGMAIVAACGLLASPVVATLNAN--HIPNSFYRAYAVWVAVAFVVMLLGIAVARLLLRRGVLPSVAVYAMGMYLGFTVALLGHETVGRPASGADIAPQIAQKLTPEMPLYGVQMLDHTLPFYLRHPLMMVGQADELTFGATVEPQRVVPDVDSFTKLWKNGQPAMAVMSPDTYLALAPTLSMYVVARDWRRVVVANVASLAGPQ |
4EV6 Chain:A ((282-307)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LTMVTTIFAVPMWITGIYGMNFSYLP-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EV6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5338 for 85 contacts (-62.8/contact) +
2D Compatibility (PS) -2650 + (NN) -587 + (LL) 45696
1D Compatibility (HY) -2400 + (ID) 150
Total energy: 34571.0 ( 406.72 by residue)
QMean score : -0.007
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