Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFFSKDEKNPIKRALQGELLQNEPFIQLCTKIENYLMDTEAVNEQLIELNEQLTMRLKEKGLKPG-----EKGATKQLRTLIQEILTEAGFR----EGM---LQTIGNKPLKKEDFMFLVSSGFMLKDSSLRASSHGELTHAIQWCLIILKQKKDSSFLENIPTSEICDRIYKKLGHQDSSNPNYPFTCWDVLIDKLGEIDSR--SPEWLSDHIQNDEDQIFPVLREVIKNRTEKGKTEENKGKLQKKLENPPEHYEKHEEIENILMPKPK |
1JA1 Chain:A ((7-183)) | ----------------------------------------PVKES------SFVEKMKKTGRNIIVFYGSQTGTAEEFANRLSKDAHRYGMRGMSADPEEYDLADLSSLPEIDKSLVVFCMATY----------GEGDPTDNAQDFYDWLQETDVD--LTGVK--------FAVFGLGNKTYEHF-NAMGKYVDQRLEQLGAQRIFELGLGDDDGNLEEDFITWREQFWPAVCEFFGVEATGEE--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JA1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13564 for 1254 contacts (-10.8/contact) +
2D Compatibility (PS) -17139 + (NN) -5667 + (LL) 6704
1D Compatibility (HY) -6800 + (ID) 1100
Total energy: -37566.0 ( -29.96 by residue)
QMean score : 0.241
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