Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKLLNTLVCIIG---LTSFSSSAKLVNAEHLDALYQKVTVANKTELGLI--HIYSEFPDYRWVKDPIEG--VSAIDDVARAAIFYQRQYQATGSAADLEKVKSLVEFILYQ-RADNGYFYNFIYPDHSINKEYKTSVAEPNWWTWRALWALTQVYPTLVKTDNALAQRTRETIFATIDVIYKDFNFKQTRGEKEGVAVPEWLPHTAGDQASVLLMALSDAQALEAK--PEIEKMMRSLAAGIMLMQVKDTSSPVNGAFL------------SWQNLWHGYGNSQ----AYALLVAGNRL---------GDRDMIKAAFNELDHFHPWLISNG-LLNEFTVRQQGEKVTLIEQKKFSQIAYIIRPMVFANIKAWEISRDAVYLERAVDLSLWFFK-NNPAQ--AQMYYPVTGIAFDGIDSATTVNKNSG-AESTIEALLTLQLIES-----IPDAKRMLESALEKRNIKQ--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1UG9 Chain:A ((2-1020)) | TAEPPGSPGAAATWTKGDKEGVGTSLNPASKVWYTLTEGTMSEVYYPHADTPNTRELQFAVSDGTSAQRESEQTTRTVELADPKALSYRQTTTDNAGRWRLTKTYVTDPRRSTVMLGVTFEVLDGGDYQLFVLSDPSLAGTSGGDTGSVTDGALLASDLADAATPVATALVSSVGFGAVANGYVGTSDGWTDLAADGRLDNASATAGPGNISQTGQIPLAAGGKTEFSLALGFGADTAEALATAKASLGTGYKKVSKSYTGEWKKYLNSLDAPATSLTGALRTQYDVSLMTVK-SHEDKTFPGAFIASLTIPWGQAASAETHREGYHAVWARDMYQSVTALLAA-------GDEEAAARGVEWLFTYQQQPDGHFPQTSRVDGTIGQNGIQLDE-----TAFPILLANQIGRTD-------AGFYRNELKPAADYLVAAGPKTPQERWE------ETGGYSTSTLASQIAALAAAADIAGKNGDAGSAAVYRATADEWQRSTEKWMFTTNGPVGDGKYYLRISATGNPNDGATRDWGNGAGVHPENAVLDGGFLEFVRLGVKAPADPYVAD----SLAETDASISQETPGGRMWHRYTYDGYGEKADGSPWDGTGIGRLWPLLSGERGEYALANGQ---DALPYLETMHSAANAGYMIPEQVWDRDEPTSYGHELGRSTGSASPLSWAMAQYVRLAAGVKAGAPVETPQNVAARYAAGTPLSSPELSVTAPEALSTADSATAVVRGTTNAAKVYVSVNGTATEAPVTDGTFSLDVALTGAKNKVTVAAVAADGGTAVEDRTVLYYGSRIGALSDPAGDDNGPGTYRYPTNSAYVPGAFDLTGVDVYDAGDDYAFVATIAGEVTNPWGGQAISHQRVNIYLGKGEGGATPGLPGTNINLEHAWDSVIVTDGRFDGAGVYAPDGTRTSAVSLLAVPEARQIVTRVPKAALGGLDPATARMSVAMFGNAESGEGIGNVRPVYDGAYWEAGDPAWIKEWRFGGGAGVFDGTIPSRDTDTDDPNALDVLVGEGQTQAAVLDWRAGSPVVVPMLGLQP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73891 for 3205 contacts (-23.1/contact) +
2D Compatibility (PS) -41593 + (NN) -20417 + (LL) 2244
1D Compatibility (HY) 20000 + (ID) 2150
Total energy: -115807.0 ( -36.13 by residue)
QMean score : 0.267
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