Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKLYTTLLIACLAAGFTACNDDDCEDLHLGNLAHYPNVL--KGTFPTESQVLELGETLEITPELLNPEGATYSWLVNGKEYSTEPTFSYKIDNPCRADLSCI----IKNKYGKVEMSTSFSSNHNFSKGFFYVADGTFNFYDTEKKTAYQDCYASLNAGKTLGIGNYDSANIIHSNGKFYLLVGTSTSN-RDHFYI-VDAKTLYYENSAVVGANLSGLTILNEQYGL-VTGDGIRRIDLKS-LNNVRIKNERLLCFYNSIIYNGKVLSNDTYKDESKVKYYDVNELIAAKEGEAPAVTELDIIQKQKINFVLAKDGNVYTLESADNGCNIVKIKNDFTLEKV-FANF-QPAK-GPYHSSPTIGMVASETENIIYLVSTDGAIY-KYILGDSDSLKAPFIAAES-G-----------------VS-ITAPLQLNQQSGELYVTYTEERKDESK-IV-VYSKDGKVLHTVDCGESVPSQILFNN---- |
| 1EYB Chain:A ((2-440)) | AELKYIS----------------GFGNECSSEDPRCPGSLPEGQNNPQVCPYNLYAEQLSGSAFTCPRSTNKRSWLYRILPSVSHKPFESIDEGHVTHNWDEVDPDPNQLRWKPFEIPKASQKKVDFVSGLHTLC----------------------------GAGD------IKSNNGLAIHIFLCNTSMENRCFYNSDGDFLIVPQK--------GNLLIYTEFGKMLVQPNEICVIQRGMRFSIDVFEETRGYILEVY---GVHFELPDLGPIGANGLAN------PRDFLIPIAWYEDRQVPGGYTVINKYQGKLFAAKQDVSPFNVVAWHGNYTPYKYNLKNFMVINSVAFDHADPSIFTVLTAKSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGFLPGGGSLHSTMTPHGPDADCFEKASKVKLAPERIADGTMAFMFESSL-SLAVTKWGLKASRLKSHFTPNSRN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EYB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -8194 for 2788 contacts (-2.9/contact) +
2D Compatibility (PS) -38502 + (NN) -904 + (LL) 4052
1D Compatibility (HY) 7200 + (ID) 1850
Total energy: -38198.0 ( -13.70 by residue)
QMean score : 0.159
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