Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGSSHHHHHHSSGPQQGLRSNSDDAEKPVVPVPTGDVAIYTTTSSLTRDLTRDAVNFSPKDNLAPTTITLNPAEQYQTMDGFGAAITGSTCYNLLLMKPADRHAFLTETFSDKDGFGFSYIRISIGCSDFSLSEYTCCDTKG---IENFALQSEEKDYILPILKEILAI-NPSIKVIAAPWTCPKWMKVKSLTDRTPLDSWTNGQLNPDYYQDYATYFVKWIQAFKAEGIDIYAVTPQNEPLNR----GNSASLYMEWEEQRDFVKTALGPQMKAAGL-STKIYAFDHNYNYDNIESQKNYPGKIYEDAAASQYLAGAAYHNY----GGNREELLNIHQAYPEKELLFTETSIGTWNSGRDLSK---RLMEDMEEVALGTINNWCKGVIVWNLMLDNDRGPNREGGCQTCYGAVDINNSDYKTIIRNSHYYIIAHLSSVVKPGAVRIATTGYTDNGITCSAFENTDGTYAFVLINNNEKSKKITVSDGQRHFAYDV-PGKSVTSYRWAKSK |
| 1OGS Chain:A ((1-497)) | ARPCIPKSFGYSSVVCVCNATYCDSFDPPTFPALGTFSRYESTRSGRR-MELSMGPIQANHTGTGLLLTLQPEQKFQKVKGFGGAMTDAAALNILALSPPAQNLLLKSYFSE-EGIGYNIIRVPMASCDFSIRTYTYADTPDDFQLHNFSLPEEDTKLKIPLIHRALQLAQRPVSLLASPWTSPTWLK---TNGAVNGKGSLKGQPGDIYHQTWARYFVKFLDAYAEHKLQFWAVTAENEPSAGLLSGYPFQCLGFTPEHQRDFIARDLGPTLANSTHHNVRLLMLDDQ-----RLLLPHWAKVVLTDPEAAKYVHGIAVHWYLDFLAPAKATLGETHRLFPNTMLFASEACVGSKFWEQSVRLGSWDRGMQYSHSIITNLLYHVVGWTDWNLALNPEGGPNWVRNFVDSPIIVDITK---DTFYKQPMFYHLGHFSKFIPEGSQRVGLVASQKNDLDAVALMHPDGSAVVVVLNRSSKDVPLTIKDPAVGFLETISPGYSIHTYLWHRQ- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -183016 for 4343 contacts (-42.1/contact) +
2D Compatibility (PS) -51863 + (NN) -22659 + (LL) 216
1D Compatibility (HY) -26400 + (ID) 5900
Total energy: -289622.0 ( -66.69 by residue)
QMean score : 0.413
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