Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSPTISHKDSSRQRRPGNFSHSLDMKSGPLPPGGWDDSHLDSAGREGDREALLGDTGTGDFLKAPQSFRAELSSILLLLFLYVLQGIPLGLAGSIPLILQSKNVSYTDQAFFSFVFWPFSLKLLWAPLVDAVYVKNFGRRKSWLVPTQYILGLFMIYLSTQVDRLLGNTDDRTPDVIALTVAFFLFEFLAATQDIAVDGWALTMLSRENVG---YASTCNSVGQTAGYFLGNVLFLALESADFCNKYLRFQPQPRGIVTLSDFLFFWGTVFLITTTLVALLKKENEVSVVKEETQGITDTYKLLFAIIKMPAVLTFCLLILTAKIGFSAADAVTGLKLVEEGVPKEHLALLAVPMVPLQIILPLIISKYTAGPQPLNTFYKAMPYRLLLGLEYALLVWWTPKVEHQGGFPIYYYI-VVLLSYALHQVTVYSMYVSIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPSTVALWLVDPLTVKECVGASNQNCRTPDAVELCKKLGGSCVTALDGYYVESIICVFIGFGWWFFLGPKFKKLQDEGSSSWKCKRNN |
| 4WW4 Chain:A ((3-458)) | QISEV--RGNTRDHRTAAHTHIKGLG-------------LNSSG--------IAEKQAAGFVGQ-CAAREACGVVVDLIKAHKMAG---------RGVLLAGGPGTGKTALALAISQELGTKIPFCPITGSEIYSTEVKKTEVLMENFR--------------RAIGLRVRETKDVYEGEVSTLLIGLKSAR------GQKLDQKERVQVGDVIYIETNTGACRSDAY-----------ATEFDLEAEEYVPIPKG----------------------EVHKKKEIVQDVTLHDLDVANARPDI--ISMMGQLMKPKMTEITDKLRMEINKVVQ--KYINQGVAELIPGVLFIDEAHM-----LDIECFTYLNKALES--PIAPIVVLASNRGIATIRGADDLKAAHGIPPDFLQRLLIIPTHPYEPDEIRRIVRIRAQTEGVQLT------DAAVDRVAEHGVRISLRYCLQLLAPASILARVNGRTQ------------------VDVQDIAEAEEL-----------FLDARRSANILTSTGGLH----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WW4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194648 for 3076 contacts (-63.3/contact) +
2D Compatibility (PS) -41358 + (NN) 8920 + (LL) 8356
1D Compatibility (HY) -7200 + (ID) 3600
Total energy: -229530.0 ( -74.62 by residue)
QMean score : 0.157
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