Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAAATAAAALAAADPPPAMPQAAGAGGPTTRRDFYWLRSFLAGGIAGCCAK-----TTVAPLDRVKVLLQAHNHHYKHLGVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGISGHVHRLMAGSMAGMTAVICTYPLDMVRVRLAFQVKGEHSYTGIIHAFKTIYAKEGGFFGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSHAPTLLGRPSSDNPNVLVLKTHVNLLCGGVAGAIAQTISYPFDVTRRRMQLGTVLPEFEKCLTMRDTMKYVYGHHGIRKGLYRGLSLNYIRCIPSQAVAFTTYELMKQFFHLN |
4K6L Chain:G ((1-224)) | -----VDFVYRVDSTPPDVIFRDGFSLLGYNRN---FQQFISGRSCSGGSSDSRYIATTSSVNQTYAIARAYYSRSTFKGNLYRYQIRADNN----FYS----------LLPSITYLETQ------------GGHFNAYEKTMMRLQREYVSTLSILPENIQKAVALVYD-SATGLVKDGVSTMN-----------------------------------------ASYLGLSTTSNPGVIPF--------------------LPEPQTYTQQRIDAFGPLISSCFSIGSVC---HSHRGQRADVY---NMSFYDARPVIELILSK----------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4K6L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -103496 for 1722 contacts (-60.1/contact) +
2D Compatibility (PS) -23508 + (NN) -7841 + (LL) 7732
1D Compatibility (HY) -7200 + (ID) 1650
Total energy: -135963.0 ( -78.96 by residue)
QMean score : 0.194
|
|
|