Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSSVAHLARANPFNTPHLQLVHDGLGDLRSSSP--------GPTGQPRRPRNLAAAAVEEQ------YSCDYGSGRFFILCGLGGIISCGTTHTALVP--LDLVKCRMQVDPQKYKGIFNGFSVTLK-EDGVRGLAKGWAPTFLGYSMQGLCKFGFYEVFKVLYSNMLGEE---NTYLWRTSLYLAASASAEFFADIALAPMEAAKVRIQTQPGYANTLRDAAPKMYKEEGLKAFYKGVAPLWMRQIPYTMMKF-ACFERTVEAL-------YKFVVPKPRSECS----KPEQLVVTFVAGYIAGVFCAIVSHPADSVVSVLNKEKGSSASLVLKRLGFKGVWKGLFARII-MIGTLTALQWFIYDSVKVYFRLPRPPPPEMPESLKKKLGLTQ------------------ |
| 4XGC Chain:E ((1-458)) | MEAICSSLEPLFPCREAAIETLGELIGDSSETYPSAIYLFGHSGTGKTALTRAFLKECGKRQNVRTAHLNAIECYTTKIMLEILLDSLAPDQGDALKVDNMLDFVEQLRRQAATRVED--QGFLIAVDNAERLRDMDANVLPVLL--RLQELTNLN---LCVILLSQLPFEKFYNKTGLSEIVCLHLAQYNKAETQRILGSDFQQVRNQLLEQKKRLEICQEAVTEDFYNNYLNLFLSVFYKA-CRDVPELQLTARKCLSTYLEPVLDGTSRLWRHIAGPLRSALTQIYMRIESLELPYYAKFLL-IAAFLASHNAAKQDKRLFSTTLGPKSFSIDRL--LAIFYAILEEKVGLTCNLLSQISTLVHLNLLSFVSGEQNIMEGSARLQCTIGLEFVLQIGKVVGFNVRQYLCD |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149710 for 2352 contacts (-63.7/contact) +
2D Compatibility (PS) -36649 + (NN) -7913 + (LL) 528
1D Compatibility (HY) -14400 + (ID) 2800
Total energy: -210944.0 ( -89.69 by residue)
QMean score : 0.239
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