Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MPSSLPGSQVPHPTLDAVDLVEKTLRN-EGTSSSAPVLEEGDTDPWTLPQLKDTSQPWKELRVAGRLRRVAG------SVLKACGLLGSLYFFICS-----LDVLSSAFQLLGSKVAG------------DIFKDNVVLSNPVAGLVI------------GVLVTALVQ-----SSSTSSSIVVSMVAAKLLTVRVSVP-------IIMGVNVGTSITSTLVSMAQSGDRDEFQRAFSGSAVHGIFNWLT-VLVLLPLESATALLERLSELALGAASLTPRAQAPDILKVLTKPLTHLIVQLDSDMIMSSATGNATN----SSLIKHWCGTTGQPTQENSSCGAFGPCTEKNSTAPADRLPCRHLFAGTELTDLAVGCILLAGS-----LLVLCGCLVLIVKLLNSVLRGRVAQVVRTVINADFPFPLGWLGGYLAVLAGAGLTF------------------------ALQSSSVFTAAVVPLMGVGVISLDRAYPLLLGSNIGTTTTALLAALASPADRMLSALQVALIHFFFNLA---GILLWYLVPALRLPIPLARHFGVVTARYRWVAGVYLLLGFLL--LPLAAFGLSLAGGMELAAVGGPLVGLVLLV-ILVTVLQRRRPAWLPVRLRSWAWLPVWLHSLEPWDRLVTRCCPCNVCSPPKATTKEAYCYENPEILASQQL-------------------------------------------------------------------------------------------- |
| 3NOW Chain:A ((138-923)) | NAKTSTKVKQMMDLTFDLATPIDKRRAAANNLVVLAKEQTGAELLYKDHCIAKVASLTKVEKDQDIYVNMVHLVAALCENSVERTKGVLTELGVPWFMRVLDQKHENCVSTAQFCLQTILNALSGLKNKPDSKPDKELCTRNNREIDTLLTCLVYSITDRTISGAARDGVIELITRNVHYTALEWAERLVEIRGLCRLLDVCSELEDYKYESAMDITGSSSTIASVCLARIYENMYYDEAKARFTDQIDEYIKDKLLAPDMESKVRVTVAITALLNGPLDVGNQVVAREGILQMILAMATTDDELQQRVACECLIAASSKKDKAKALCEQGVDILKRLYHSKNDGIRVRALVGLCKLGSYGGQDAAIRPFGDGAALKLAEACRRFLIKPGKDKDIRRWAADGLAYLTLDAECKEKLIEDKASIHALMDLARGGNQSCLYGVVTTFVNLCNAYEKQEMLPEMIELAKFAKQHIPEEHELDDVDFINKRITVLANEGITTALCALAKTESHNSQELIARVLNAVCGLKELRGKVVQEGGVKALLRMALEGTEKGKRHATQALARIGITINPEVSFSGQRSLDVIRPLLNLLQQDCTALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVMSEDVIKMFEGNNDRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMINAGEEIAKKLFETDIMELLSGLGQLPDDTRAKAREVATQCLAAAERYRII |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NOW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -409605 for 5002 contacts (-81.9/contact) +
2D Compatibility (PS) -61382 + (NN) -11478 + (LL) 0
1D Compatibility (HY) 800 + (ID) 2950
Total energy: -484615.0 ( -96.88 by residue)
QMean score : 0.266
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