Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------MASVLSYES-LVHAVAGAVGSVTAMTVFFPLDTARL-RLQVDEKRKSKTTHMVLL---EIIKEEGLLAPY--RGWFPVISSLCCSNF--VYFYTFN--------SLKALWVKGQHSTT-GKDLVVGFVAG-VVNVLLTTPLWVVNTRLKLQGA-------------KFRNEDIVPTNYKG-I---IDAFHQI--IRDEG-ISALWNGT---FPSLLLVFNPAIQF-----MFYEGLKRQLLKKRMKLSSLDVFIIGAVAKAI-----ATTVTYPLQ------TVQSILRFGRHRLNPENRTLGSLRNILYLLHQ-RVRRFGIMGLYKGLEAKLLQTVLTAALMFLVYEKLTAATFTVMGLKRAHQH---- |
| 4PEV Chain:A ((52-421)) | PISVLVLFDVGGRGDLSFNDMAALGADRAAEELGVDVVFQTPQSLAVMESVLDAASRSGEYDLIVLVGFLWQEPLEKVAPRYPEQKYALIDAATRERYDNVASYLFREQEVASLVGIIAADIANNISKATGEEAKAGAVAGMDIPPLWRFHIGYLYGVQYYNQAMGTDVEMVWTYTGRFDDPTLGKTTAEQMLQQGVRVFYGVAGLTHVGMFNAVKEAAARGVIAFSIGQDASQEWYDPQTIIISGLKR-----------VDVAVYTAIKDVVEGRFRGGIVSLGLKEGGLGLSDEEIIRYFAEIAAETGQLPEGLTPEKVVEIVMSQREKWISNDGWRLVEELKQKIISGEIKFVTPQDHDTYDSIIEELKAGNLEAALE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PEV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110124 for 2032 contacts (-54.2/contact) +
2D Compatibility (PS) -30371 + (NN) -4257 + (LL) 1092
1D Compatibility (HY) 16400 + (ID) 850
Total energy: -128110.0 ( -63.05 by residue)
QMean score : 0.176
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