Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------MAFSEL-LDLVGGLGRFQVLQTMALM---VSIMWLCT----------QSMLENFSAAVPSHRCWAPLLDNSTAQASILGSLSPEALLAISIPPGPNQRPHQCRRFRQPQWQLLDPNATATSWSEADTEPCVDGWVYDRSIFTSTIVAKW----NLVCDSHALKPMAQSIYLAGILVGAAACGPASDRFGRRLVLTWSYLQMAVMGTAAAFAPAFPVYCLFRFLLAFAVAGVMM--NTGTLLMEWTA--------ARARPLVMT---LNSLGFSFGHGLTAAVAYGVRDWTLLQLVV-------------SVPFFLCFLYSWWLAESARWLLTTGRLDWGLQELWRVAAINGKGAVQDTLT-------------PEVLLSAMREE----LSMGQPPASLGTLLRMPGLRF--------RTCISTLCWFAFG----------------FTFFGLALDLQ-ALGSNIFLLQMFIGV---------VDIPAKMGALL--LLSHLGRRPTLAASLLLAGLC----ILANTLVPH--EMGALRSALAVLGLGGV-------GAAFTCI-----TIYSSELFPTVLRMTAVGLGQMAARGGAILGPLVRLLGVHGPWLPLLVYGTVPVLSGLAALLLPETQSLPLPDTIQDVQN-QAVKKATHGTLGNSVLKSTQF--------------------------------------------------------------- |
3BZC Chain:A ((1-730)) | MDSINTRIAEELSALPSGRVQPQQVAAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRMLEERLRYLRELEERRGAILASIEEQGKLTPELARDIKLAD-TKTRLEDLYLPYKQK-----RRTKGQIALEAGLGALADALFDDPTLVPESEAARFVDAEKGFADVKAVLEGAKYILMERFAEDATLLDKLRVFMKNEATLTARVVPGK-EQEGAKFSDYFEHDEPLKSAPSHRALAIFRGRNEGVLSASLKVGEEAPGTLHPCEVMIAERFGLSNQGRAADKWLAEVVRWTWKVKLYTHLETDLFGELRDGAEDEAISVFARNLHDLLLAAPAGPRATLG-LDPGLRTGVKVAVVDATGKLLDTATVYPHAPKNQWDQTLAVLAALCAKHQVELIAIGNGTASRETDKLAGELIKKYPGMKLTKIMVSEAGASVYSASELAAKEFPELDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVSQLKLARSLDAVVEDCVNAVGVDVNTASAALLARISGLNSTLAQNIVAHRDANGAFRTRDELKKVSRLGEKTFEQAAGFLRVMNGDNPLDASAVHPETYPLVQRIAADTERDIRSLIGDSAFLKRLDPKKFTDETFGLPTVTDILKELDKPGRDPRPEFKTAEFQEGVESLKDLKPGMVLEGVVTNVTNFGAFVDIGVHQDGLVHISALSEKFVKDPYEVVKAGDIVKVKVMEVDIPRNRVGLSMRMSDTPG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3BZC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -383682 for 3901 contacts (-98.4/contact) +
2D Compatibility (PS) -56494 + (NN) -15427 + (LL) 672
1D Compatibility (HY) -2400 + (ID) 5000
Total energy: -462331.0 ( -118.52 by residue)
QMean score : 0.200
|
|
|