Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFTDLLDALGSMGRFQLNHTALLLLPCGLLACHNFLQNFTAAVPPHHCRGPANHTEASTNDSGAWLRATIPLDQLGAPEPCRRFTKPQWALLSPNSSIPGAATEGCKDGWVYNRSVFPSTIVMEWDLVCEARTLRDLAQSVYMAGVLVGAAVFGSLADRLGCKGPLVWSYLQLAASGAATAYFSSFSAYCVFRFLMGMTFSGIILNSVSLVVEWMPTRGRTVAGILLGYSFTLGQLILAGVAYLIRPWRCLQFAISAPFLIFFLYSWWLPESSRWLLLHGKSQLAVQNLQKVAAMNGRKEEGERLTKEVMSSYIQSEFASVCTSNSILDLFRTPAIRKVTCCLMVIWFSNSVAYYGLAMDLQKFGLSLYLVQALFGIINTPAMLVATATMIYVGRRATVASFLILAGLMVIANMFVPEGTQILCTAQAALGKGCLASSFICVYLFTGELYPTEIRQMGM-GFASVHAR-LGGLTAPLVTTLGEYSTILPPVSFGATAILAGLAVCVLTE-----TRNMPLVETIAAMERRVKEGSSKKHVEEKSEE-ISLQQLRASPLKETI |
| 2IML Chain:A ((3-193)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LRLADFGFTDGINEIIAITENEDGSWNAAPIGIIVEDSSSDTAKAKLYRNRTRANLERSGVLFANVTDDALVFAVSSFGNL----NDDWYASPNPPIIKGAMAWCRFEAEMRSGVAHLKLTDGEIIEKRVRAINRGLSAVIEALVHATRYVAIKSDERRKELLERIHYYREIVQKCGSEREKRAFEIIMEKIGEG--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105525 for 1439 contacts (-73.3/contact) +
2D Compatibility (PS) -19701 + (NN) -6354 + (LL) 27492
1D Compatibility (HY) 4800 + (ID) 1300
Total energy: -100588.0 ( -69.90 by residue)
QMean score : 0.121
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