Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSSVTALGQARSSGPGMAPSACCCSPAALQRRLPILAWLPSYSLQWLKMDFVAGLSVGLTAIPQALAYAEVAGLPPQYGLYSAFMGCFVYFFLGTSRDVTLGPTAIMSLLVSFYTFHEPAYAVLLAFLSGCIQLAMGVLRLGFLLDFISYPVIKGFTSAAAVTIGFGQIKNLLGLQNIPRPFFLQVYHTFLRIAETRVGDAVLGLVCMLLLLVLKLMRDHVPPVHPEMPPGVRLSRGLVWAATTARNALVVSFAALVAYSFEVTGYQPFILTGETAEGLPPVRIPPFSVTTANGTISFTEMVQDMGAGLAVVPLMGLLESIAVAKAFASQNNYRIDANQELLAIGLTNMLGSLVSSYPVTGSFGRTAVNAQSGVCTPAGGLVTGVLVLLSLDYLTSLFYYIPKSALAAVIIMAVAPLFDTKIFRTLWRVKRLDLLPLCVTFLLCFWEVQYGILAGALVSLLMLLHSAARPETKVSEGPVLVLQPASGLSFPAMEALREEILSRALEVS-PPRCLVLECTHVCSIDYTVVLGLGELLQDFQ--KQGVALAFVGLQVPVLRVLLSADL---KGFQYFSTLEEAEKHLRQEPGTQPYNIREDSILDQKVALLKA |
| 2Q3L Chain:A ((19-125)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DFYLAFKAVGKL-THEDYEQMTPLLESALAGIKTPEIVALIDITELDGLSLHAA--WDDLKLGLKHGKEFKRVAIIGQGELQEWATRVANWFTPGEFKFFEDKRDALDWLC------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q3L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53219 for 652 contacts (-81.6/contact) +
2D Compatibility (PS) -10983 + (NN) -3919 + (LL) 38644
1D Compatibility (HY) -2000 + (ID) 650
Total energy: -32127.0 ( -49.27 by residue)
QMean score : 0.343
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