Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGVCQRTRAPWKEKSQLERAALGFRKGGSGMFASGWNQTVPIEEAGSMAALLLLPLLLLLPLLLLKLHLWPQLRWLPADLAFAVRALCCKRALRARALAAAAADPEGPEGGCSLAWRLAELAQQRAAHTFLIHGSRRFSYSEAERESNRAARAFLRALGWDWGPDGGDSGEGSAGEGERAAPGAGDAAAGSGAEFAGGDGAARGGGAAAPLSPGATVALLLPAGPEFLWLWFGLAKAGLRTAFVPTALRRGPLLHCLRSCGARALVLAPEFLESLEPDLPALRAMGLHLWAAGPGTHPAGISDLLAEVSAEVDGPVPGYLSSPQSIT--DTCLYIFTSGTTGLPKAARISHLKILQCQGFYQLCGVHQEDVIYLALPLYHMSGSLLGIVGCMGIGATVVL---KSKFSAGQFWEDCQQHRVTVFQYIGELCRYLVNQPPSKAERGHKVRLAVGSG--LRPDTWERFVRRFGPLQVLETYGLTEGNVATINYTGQRGAVGRASWLYKHIFPFSLIRYDVTTGEPIRDPQGHCMATSPGEPGLLVAPVSQQSPFLGYAGGPELAQGKLLKDVFRPGDVFFNTGDLLVCDDQGFLRFHDRTGDTFRWKGENVATTEVAEVFEALDFLQEVNVYGVTVPGHEGRAGMAALVLRPPHALDLMQLYTHVSENLPPYARP-RFLRLQESLATTETFKQQKVRMANEGFDPSTLSDPLYVLDQAVGAYLPLTTARYSALLAGNLRI |
| 1AMU Chain:A ((17-530)) | --------GTHEEEQYLFA-------------------------------------------------------VNNTKAEYP-RDKTIHQLFEEQVSKR-------------------------PNNVAIVCENEQLTYHELNVKANQLARIFIEK----------------------------------------------------GIGKDTLVGIMMEKSIDLFIGILAVLKAGGAYVPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHNI--QFN--GQVEIFEED------------TIKIR-----EGTNLH-VPSKST-DLAYVIYTSPKGTMLEHKGISNLKVFFEN--SLN-VTEKDRIGQFASISF-DASVWEMFMALLTGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVHL----DPERI--LSIQTLITAGSATSPSLVNKWKEKV---TYINAYGPTETTICATTWVATKETIGHSVPIGAPIQNTQIYIVDE-NLQL----------KSVGEAGELC--IGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGDQARWLSDGNIEYLGRIDNQVKIRGHRVELEEVESILLKHMYISETAVSVHKDH-QEQPYLCAYFVSE--KHIPLEQLRQFSSEELPTYMIPS-YFIQLDKMPLTSNGKIDRKQLPEPDLTF----------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1AMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -343905 for 4282 contacts (-80.3/contact) +
2D Compatibility (PS) -53469 + (NN) -22442 + (LL) 9460
1D Compatibility (HY) -18800 + (ID) 4050
Total energy: -433206.0 ( -101.17 by residue)
QMean score : 0.426
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