Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLGASLVGVLLFSKLVLKLP-WTQVGFSLLFLYLGSGGWRFIRVFIKTIRRDIFGGLVLLKVKAKVRQCLQERR-TVPILFASTVRRHPDKTALIFEG----TDTHWTFRQLDEYSSSVANFLQARGLASGDVAAIFMENRNEFVGLWLGMAKLGVEAALINTNLRRDALLHCLTTSRARALVFGSEMASAICEV--HASLD--------PSL-SLFCSGSWEPG--AVPPSTEHLDPLLKDAPKHLPSCPDKGF-TDKLFYIYTSGTTGLPKAAIVVHSRYYRMAAL-VYYGFRMRPNDIVYDCLPLYHSAGNIVGIGQCLLHGMTVVIRKK----FSASRFWDDCIKYNCTIVQYIGELCRYLLNQPPRE--AENQHQVR--MALGNGLRQSIWTNFSSRFHI--PQVAEFYGATECNCSLGNF-----DSQVGACGFNSRILSFVYPIRLVRVNEDTMELIRGPDGVCIPCQPGEPGQLVGRIIQKDPLRRFDGYLN-QGANNKKIAKDVFKKGDQAYLTGDVLVMDELGYLYFRDRTGDTFRWKGENVSTTEVEGTLSRLLDMADVAVYGVEVPGTEGRAGMAAVASPTGN----CDLERFAQVLEKELPLYARPIFLRLLPELHKTGTYKFQKTELRKEGFDPAIVKDPLFYLDAQKGRYVPLDQEAYSRIQAGEEKL |
| 1PG4 Chain:A ((19-622)) | ----INPEQYETKYKQSINDPDTFWGEQGKI--LDWITPYQKVKNTSFA-P-----------GNVSIKWYEDGTLNLAANCLDRHLQENGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQ--PEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAIELKAGSATRP------FFGVQPALVDNE---------G--HPQEGATEGNLVITDSW---PGQARTLFGDHERF----EQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAI-KGQAIYAYVTLNHGEEPSPELYAEVRNWVRKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDADPGVVEKLLEEKQA-------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1PG4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -337589 for 4977 contacts (-67.8/contact) +
2D Compatibility (PS) -59626 + (NN) -18848 + (LL) 4604
1D Compatibility (HY) -14000 + (ID) 5700
Total energy: -431159.0 ( -86.63 by residue)
QMean score : 0.404
|
|
|