Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MCRCPPEHHDGRMTSAEVGAAAGGAQAAGPPEWPPGSPQALRQPGRARVAMAALVWLLAGAS-------MSSLNKWIFTVHG----FGRPLLLSALHMLVAALACHRGARRPMPGGTRCRVLLLSLTFGTSMACGNVGLRAVPLDLAQLVTTTTPLFTLALSALLLGR--------RHHPLQLAAMGPLCLG-------AACSLAGEFRTPPTGCGFLLAATCLRGL------------------KSVQQSALLQEERLDAVTLLYATSLPSFCLLAGAALVLEAGVAPPPTAGD-SRLWACILLSCLLSVLYNLASFSLLALTSALTVH-VLGNLTVVGNLILSRLLFGSRLSALSYVGI-----ALTLSGMFLYHNCEFVASWAARRGLWRRDQPSKGL--- |
| 4D10 Chain:C ((3-403)) | SALEQFVNSVRQLSAQGQMTQLCELINKSGELLAKNLSHLDTVLGALDVQEHSLGVLAVLFVKFSMPSVPDFETLFSQVQLFISTCNGEHIRYATDTFAGLCHQLTNALVERK---QPLRGIGILKQAIDKMQMNTNQLTS---IHADLCQLCLLAKCFKPALPY-LDVDMMDICKENGAYDAKHFLCYYYYGGMIYTGLKNFERALYFYEQAITTPAMAVSHIMLESYKKYILVSLILLGKVQQLPKYTSQIVGRFIKPLSNAYHELAQVYSTNNPS--ELRNLVNKHSETFTRDNNMGLVKQCLSSLYKKNIQRLTKTFLTLSLQDMASRVQLSGPQEAEKYVLHMIEDGEIFASINQKDGMVSFHDNPEKYNNPAMLHNIDQEMLKCIELDERLKAMDQEITVNPQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4D10.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -213366 for 2347 contacts (-90.9/contact) +
2D Compatibility (PS) -35743 + (NN) -12179 + (LL) 344
1D Compatibility (HY) -12800 + (ID) 2600
Total energy: -276344.0 ( -117.74 by residue)
QMean score : 0.138
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