Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MCFRTKLSVSWVPLFLLLSRVFSTETDKPSAQDSRSRGSSGQPADLLQVLSAGDHPPHNHSRSLIKTLLEKTGCPRRRNGMQGDCNLCFEPDALLLIAGGNFEDQLREEVVQRVSLLLLYYIIHQEEICSSKLNM---SNKEYKFYLHSLLSLRQDEDSSFLSQNETEDILAFTRQYFDTSQSQCMETKTLQKKSGIVSSEGANESTLPQLAAMIITLSLQGVCLGQGNLPSPDYFTEYIFSSLNRTNTLRLSELDQLLNTLWTRSTCIKNEKIHQFQRKQNNIITHDQDYSNFSSSMEKESEDGPVSWDQTCFSARQLVEIFLQKGLSLISKEDFKQMSPGIIQQ----LLSCSCHLPKDQQAKLPPTTLEKYGYSTVAVTLLTLGSMLGTALVLFH--SCEENYRLILQLFVGLAV-GTLSGDALL--HLIPQVLGLHKQEAPEFGHFHESKGHIWKLMGLIGGIHGFFLIEKCFILLVSPNDKQGLSLVNGHVGHSHHLALNSELSDQAGRGKSASTIQLKSPEDSQAAEMPIGSMTASNRKCKAISLLAIMILVGDSLHNFADGLAIGAAFSSSSESGVTTTIAILCHEIPHEMGDFAVLLSSGLSMKTAILMNFISSLTAFMGLYIGLSVSADPCVQDWIFTVTAGMFLYLSLV--EMLPEMTHVQTQRPWMMFLLQNFGLILGWLSLLLLAIYEQNIKI |
| 4NNB Chain:A ((4-527)) | TSLYITAAPIGAVPKFLDPFEATFIPSFLL-EGFFDADRCASIAADLKTDG--------WEVVPAGGRLLQVGHAQPIAHF----------------------PKPWLA--------ALSNKLARRIVLQLTTY----GWIVSEQGDLLWEHERQHHYLPPALIEAIEKESPALLKNMEEAGWIACAAGYWQ---------------------AGKARS--PYLP------------------ITPEAITEETIRSMRAGAA-----------------------VVHL----------HTRDLS-----------------DRRRIEIPGLGVVTVGSQRNQIVLDDYDAIVPMVKKREPAAILNLSTSVRGDRHGARSKLRRAHLKFYDDVGSAPEVASLSPAAVVFQGGGGYDNAPDFLDAQFDHFERVGTRPEVEVFNHAIVDNATSLYRDRLLRTG-------------------------KPVLFMLVAGVDQYRRDPITGEVEDDSLIA----------RVVREEISSLLADES-----------ADSHRRAVELAIGQLRPVVERLRASFP-----------------VSKISIL---LPGPMQNLLVDVALGLGL-DGIRVGLEDGLTVNDARVPGGVRKAR------------GTWEQVSLVREELLGRGATILT----AAQVRDMFGLGI----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NNB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205544 for 3760 contacts (-54.7/contact) +
2D Compatibility (PS) -47594 + (NN) -1586 + (LL) 14416
1D Compatibility (HY) -18400 + (ID) 4600
Total energy: -263308.0 ( -70.03 by residue)
QMean score : 0.156
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