Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAHAPEPDPAACDLGDERPKWDNKAQYLLSCTGFAVGLGNIWRFPYLCQTYGGGAFLIPYVIALVFEGIPIFHVELAIGQRLRKGSVGV--------WTAISPYLSGVGLGCVTLSFLISLYYNTIVAWVLWYLLNSFQHPLPWSSCPPDLNRTGFVEECQGSSAVSYFWYRQTLNITADINDSGSIQWWLLI------CLAASWAVVYMCVIRGIETTGKVIYFTALFPYLVLTIFLIRGLTLP----GATKGLIYLFTPNMHILQNPRVWLDAATQIFFSLSLAFGGHIAFASYNSPRNDCQKDAVVIALVNRMTSLYAS--IAVFSVLGFKATNDYEHCLDRNILSLINDFDFPEQSISRDDYPAVLMHLNATWPKRVAQLPLKACLLEDFLDKSASGPGLAFVVFTETDLHMPGAPVWAMLFFGMLFTLGLSTMFGTVEAVITPLLDVGVLPRWVPKEALTGLVCLVCFLSATCFTLQSGNYWLEIFDNFAASPNLLMLAFLEVVGVVYVYGMKRFCDDIAWMTGRRPSPYWRLTWRVVSPLLL-TIFVAYIILLFWKPLRYKAWNPKYELFPSRQEKLYPGWA---RAACVLLSLLPVLWVPVAALAQLLTRRRRTWRDRDARPDTDMRPDTDTRPDTDMRPDTDMR |
| 2A65 Chain:A ((5-502)) | -----------------REHWATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQGHGTTPAIFYLLWR--NRFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEPPP--TDP-------DSILRPFKEFLYSYIGV-PKGD--EPILKPSLFAYIVFLITMFINVSILIRGISKGIERFAKIAMPT---LFILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGVWIAAVGQIFFTLSLGFGAIITYASYVRKDQDIVLSGLTAATLNEKAEVILGGSISIPAAVAFFGVANAVA------------------------------------------------------IAKAGAFNLGFITLPAIFSQTAGGTFLGFLWFFLLFFAGLTSSIAIMQPMIAFLEDELKLSRK-H--AVLWTAAIVFFSAHLVMFLNKS---LDEMDFWAGTIGVVFFGLTELIIFFWIFGADKAWEEINRGGIIKVPRIYYYVMRYITPAFLAVLLVVWARE--YIPKIME-------------ETHWTVWITRFYIIGLFLFLTFLVFLAERRRNHESAGT---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A65.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -471935 for 4281 contacts (-110.2/contact) +
2D Compatibility (PS) -48167 + (NN) -13261 + (LL) 9148
1D Compatibility (HY) -39600 + (ID) 5600
Total energy: -569415.0 ( -133.01 by residue)
QMean score : 0.348
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