Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEAARTAVLRVKRKRSAEPAEALVLACKRLRSDAVESAAQKTSEGLERAAENNVFHLVATVCSQEEPVQPLLREVLRPSRDSQQRVRRNLRASAREVRQEGRYRVLSSRRSLGTTSSGQESEYTPGNPEAA-----GNSGFQLLDLVHEEGEPEAASAGSCKTSDPDVILCNSVELIRERLTVSEDGPGVRRQEEQKHDDYVYDIYYLETATPGWIENILSVQPYSQEWELVNDDQEPEDIYDDEDDENSENNWRNEYPEEESSDGDEDSRGSADYNSLSEEERGSSRQRMWSKYPLDVQKEFGYDSPHDLDSD |
| 1KC6 Chain:A ((1-257)) | -----SFI-----KPIYQDINSILIGQKVKRPAAGEPFEKLVYKFLKENLSDLTFK-------QYEYLNDLFMK--NPAIIGHEARYKLFN--------SPTLLFLLSRGKAATENWSIENLFEEKQNDTADILLVKDQFYELLDVKTRNISKSAQA--------PNIISAYKLAQTCAKMIDNKEFD-------------LFDINYLEVDWELNGEDLVCVSTSFAE--LFKS--EPSELYINW---AAAMQIQFHVRDLDQGFNGTREEWAKSYLKHFVTQAEQRAISMIDKFVKPFKKYIL---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KC6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 51451 for 1696 contacts (30.3/contact) +
2D Compatibility (PS) -25737 + (NN) -8917 + (LL) 4156
1D Compatibility (HY) -9600 + (ID) 1900
Total energy: 9453.0 ( 5.57 by residue)
QMean score : 0.150
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