Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGTETRQRRLDSCGKPGELGLPHPLSTGGLPVASEDGALRAPESQSVTPKPLETEPSRETTWSIGLQVTVPFMFAGLGLSWAGMLLDYFQHWPVFVEVKDLLTLVPPLVG---------------LKGNLEMTL----ASRLSTAANTGQIDDP---QEQHRVISSNLA------LIQVQATV-------VGLLAAVAALLLGVVSREEVDVAKV-----ELLCASSVLTAFLAAFA---------LGVLMVCIVIGARKLG----------VNPDNIATPIAASLGDL-ITLSILALVSSFFYR-HKDSRYLTPLVCLSFAALTPV------WVLIAKQSPPIVKILKFGWFPIILAMVISSFG---GLILSKTVSKQQYKGMAIFTPVICGVGGNLVAIQTSRISTYLHMWSAPGVLPLQMKKFWPNPCST--FCTSEINSMSARVLLLLVV----------PGHLIFFYIIYLVEGQSVINSQTFVVLYLLAGLIQVTILLYLAEVMVRLTWHQALDPDNH-------CIPYLTGLGDLLGSSSVGHTAAVPRRCTASPGWGLIQPFICTQHLIVSLLSFYFPFCLLAKTSI------------------------------------------------------------------------------ |
| 4UIR Chain:A ((2-646)) | NPITSKFDKVLNA---SSEYGHVNHEPDSSKEQQRNTPQKSMPFSDQIGNYQRNKGIPVQSYDNSKIYII--------GSGIAGMSAAYYFIRDGHVPAKNITFLEQLHIDGGSLDGAGNPTDGYIIRGGREMDMTYENLWDMFQDIPALEMPAPYSVLDEYRLINDNDSNYSKARLINNKGEIKDFSKFGLNKMDQLAIIRLLLKNKEELDDLTIEDYFSESFLKSNFWTFWRTMFAFENWHSLLELKLYMHRFLHAIDGLNDLSSLVFPKYNQYDTFVTPLRKFLQEKGVNIHLNTLVKDLDIHINTEGKVVEGIITEQDGKEVKIPVGKNDYVIVTTGSMTEDTFYGNNKTAPIIGIDNSTSGQSAGWKLWKNLAA---KSEIFGKPEKFCSNIEKSAWESATLTC------KPSALIDKLKEYSVNDPYSGKTVTGGIITITDSNWLMSFTCNRQPHFPEQPDDVLVLWVYALFMDKEG--------NYIKKTMLECTGDEILAELCYHLGIEDQLENVQKNTIVRTAFMPYITSM--FMPRAKGDRPRVVPEGC---KNLGLVGQFVETNNDVVFTMESSVRTARIAVYKLLNLNKQVPDINPLQYDIRHLLKAAKTLNDDKPFVGEGLLRKVLKGTYFEHVLPAGEEHESFIAEHVNKFREWVKGIRG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4UIR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -406700 for 3589 contacts (-113.3/contact) +
2D Compatibility (PS) -49909 + (NN) -14095 + (LL) 2304
1D Compatibility (HY) -18800 + (ID) 4050
Total energy: -491250.0 ( -136.88 by residue)
QMean score : 0.227
|
|
|