Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---------------------------------MGHHHHHHSHMVVIHPDPGRELSPEEAHRAGLIDWNMFVKLRSQECDWEEISVKGPNGESSVIHDRKSGKKFSIEEALQSGRLTPAHYDRYVNKDMSIQELAVLVSGQK
1C20 Chain:A ((3-130))
GWSFEEQFKQVRQLYEINDDPKRKEFLDDLFSFMQKRGTPINRLPIMA---KSVLDLYELYNL-VIARGGLVDVINKK-LWQEI-IKGLHLPS-----SITSAAFTLRTQYMKYL---YPYECEKKNLSTPAELQAAIDGNR
General information:
TITO was launched using:
RESULT:
Template:
1C20.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2112 for 574 contacts (-3.7/contact) +
2D Compatibility (PS) -10626 + (NN) -5449 + (LL) -76
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -23063.0 ( -40.18 by residue)
QMean score : 0.183
(partial model without unconserved sides chains):
PDB file :
Tito_1C20.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1C20-query.scw
PDB file :
Tito_Scwrl_1C20.pdb
: