Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRPVFILGIILLLVGCKQRDERVLMVDEQGSFAVGGTVLVD---------SLGHTFHGDHAYVFYQKPVGARKYPLVFAHGVGQFSKTWETTPDGREGFQNIFLRRRFCVYLVDQPRRGNAGRGT-------------ESVTISPAFDEEVWFNRFRVGI-WPDYFEGVQFKRDKETLDQYFRQMTPTI--GTTDFEVYSDAYAALFDKIGPGVFITHSQGGPVGWNTLL-KTRNIKAIASYEPGGAVPFPEGQLPEEAKFITLSKKMEGIEVPMSVFMEYTKVPIVIYYGDNLPETDERPELYEWTRRLRLMKIWAKMLNDQGGDVTVIHLPEVGLHGNTHFPMSDLNNIEVADLLSEWLHTKALD |
1QLW Chain:A ((5-322)) | ---------------VPKTPAGPLTLSGQGSFFVGGRDVTSETLSLSPKYDAHGTVTVDQMYVRYQIPQRAKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGKAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFP--VQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKLDGTVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC-------------------------PKPEDVKPLTSIPVLVVFGDHIEEFPR------WAPRLKACHAFIDALNAAGGKGQLMSLPALGVHGNSHMMMQDRNNLQVADLILDWIGRNTA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QLW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -138577 for 2502 contacts (-55.4/contact) +
2D Compatibility (PS) -31784 + (NN) -19931 + (LL) 3700
1D Compatibility (HY) -14800 + (ID) 4750
Total energy: -206142.0 ( -82.39 by residue)
QMean score : 0.409
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