Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKKAKLILIAVLVLSGCSTIENESKKDRNTETNTETKSVPEEMEASKYVGQGFQPPAEKDAIEFSKKHKDKIAKRGEQFFMDNFGLKVKATNVVGSGDGVEVFVHCDDHDIVFNASIPFDKSIIESDSSLRSEDKGDDMSTLVGTVLSGFEYRAHKEELDNLTEVLKEYKSKYKYTGYTENAIMKTQNSGFRNEYYYLTAIPYTLDEYKRYFQPLIKEDDKSFRDGMRNSKKQLKDKSRPYVVTTLFSTKDNFTKDNTIDEMIDFSEVLKKKKNIPHDLNVSLQISNKYINTKRPNYSKKEVIEVGVFNHEKANTND |
| 3ZF7 Chain:V ((47-89)) | ----------------------------------------------------------------------------FQQYFQDNVKLNGRKGKL---TSK--VRVNMRENTLSITTTMAYRKKY-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16932 for 168 contacts (-100.8/contact) +
2D Compatibility (PS) -4908 + (NN) -3017 + (LL) 16452
1D Compatibility (HY) -3600 + (ID) 400
Total energy: -12405.0 ( -73.84 by residue)
QMean score : 0.034
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