Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTVEVEVKITADDENKAEEIVKRVIDEVEREVQKQYPNATITRTLTRDDGTVELRIKVKADTEEKAKSIIKLIEERIEEELRKRDPNATITRTVRTEVGSSWSLEHHHHHH
2CTF Chain:A ((48-99))
----------------------------NLAKITQQMPKVHIE--FTEGEDKITLE----GP-TEDVSVAQEQIEGMVK-DLINRSGP------------------------
General information:
TITO was launched using:
RESULT:
Template:
2CTF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14173 for 275 contacts (-51.5/contact) +
2D Compatibility (PS) -6238 + (NN) -6025 + (LL) 5476
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -23460.0 ( -85.31 by residue)
QMean score : 0.407
(partial model without unconserved sides chains):
PDB file :
Tito_2CTF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2CTF-query.scw
PDB file :
Tito_Scwrl_2CTF.pdb
: