Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNSRRDFLKKGALAGFSALMIPEIAKAAVKENTSVHAPKINLKKDCVILFQ-GDSITDCGRDRNSNRCNTMEQFGSGYVLFTATQLLEGKAALQPKIYNRGISGNKVYQ-LRERWEIDCLAFQPDVLSILIGVNDYWHTLTHGYKGTVETYENDLRALLK-YTKEKLPNTQIVLCEPFTLRDGAAIEDS-KWYPMFDEFRKSARKLSEEFNTIFVPFQSG-FDAAVKLAPARYWSNDGVHPDLPGRQL-MANMWMEATG-LK |
| 3P94 Chain:A ((1-204)) | --GEKGDWAQFGR-----------------------YAEANKTVKVPSNVVFMGNSITDGWWPADS------------------------TFFIRNNFVDRGISGQTTSEMLVRFRQD-VINLKPKAVVILAGINDIAHNNGV------IALENVFGNLVSMAELAKANHIKVIFCSVLPAYDFPW-RPGMQPADKVIQLNKWIKEYADKNGLTYVDYHSAMKDERNGLPAN--LSKDGVHPTLEGYKIMEKIVLEAIHKTVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P94.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55428 for 1553 contacts (-35.7/contact) +
2D Compatibility (PS) -21441 + (NN) -12260 + (LL) 4276
1D Compatibility (HY) -5200 + (ID) 2150
Total energy: -92203.0 ( -59.37 by residue)
QMean score : 0.234
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