Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------------------------------------------------------------------------------------------------------------------------------------------MKKRILSLLGVIALFLGVILVSCGNDDDNKNTTGVHKIVVEQSGNTDDFDLNIAFGAANTGGVAKLYNENGEYLGDSYLVNKVTENKISCQTGKEGSMMTCAGSVISTSEQAGKKLKISVIAYIDNKEVNRLEKEYITKGSTLVENFSVSTTSVE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 3J5P Chain:A ((1-564)) | LYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQ----LAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNT----------VDNTKFVTSMYNEILILGAKLHPTLKLEE--ITNRKG------------LTPLALAASSGKIGVLAYILQREIHEPECRHLSRKFTEWAYGPVHSSLYDLSCIDTCEKNSVLEVIAYSSSETPNRHDMLLVEPLNRLLQDKWDRFVKRIFYFNFFVYCLYMIIFTAAAYYRPVEGLPPYKLKNTVGDYFRVTGEILSVSGGVYFFFRGIQYFLQRRPSVDSYSEILFFVQSLFMLVSVVLYFSQRKEYVASMVFSLAMGWTNMLYYTRGFQQMGIYAVMIEKMILRDLCRFMFVYLVFLFGFSTAVVTLIEDGKYNSLYSTCLELFKFTIGMGDLEFTENYDFKAVFIILLLAYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQRAITILDTEKSFLKCMRKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 12663 for 869 contacts (14.6/contact) +
2D Compatibility (PS) -13188 + (NN) 528 + (LL) 1448
1D Compatibility (HY) -5200 + (ID) 1400
Total energy: -5149.0 ( -5.93 by residue)
QMean score : 0.143
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