Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MGPNAVELTTDQAWCLADVLGAGSYPWVLAITPPYSDHSQRSAFLAAQSAELTRMGV-VNSAGAVDPRVAQWITTVCRATQWLDLRFVSGPGDLLRGMVARRSEETVVALRNAQLVTFTAMDIGHQHALVPVLTAGLSGRKPARFDDFALPAAAGARADEQIRNGAPLAEVLEFLGVPPSARPLVESVFDGRRTYV---EIVAGEHRDGHRVTTEVGVSII-------------DTPHGRILVHPTKAFDGEWISTFTPGSADAIAMAVERL-TASLPSGSWFPDQPLTRDFDEDAATHREPVLQRRTQKA |
| 1KNV Chain:A ((4-293)) | NLTNSNCVEEYKENGKTKIRI--KPFNALIELYHHQT--------PTGSIKENLDKLENYVKDVVKAKGLAIPTSGAFSNTRGTWFEVMIA-IQSWNYRVKRE-----------LNDYLIIKMPNVKTFDFRKIFDNETREKLHQLEKSLLTHK----QQVRLITSNPDLLIIRQKDLIKSEYNLPINKLTHENIDVALTLFKDIEGKCKWDSLVAGVGLK-TSLRPDRRLQLVHEGNILKSLFAHLKMRYW----NPKAEF--KYYGASSEPVSKADDDALQTAATHTIVNVNSTPERAVDDIFSLTSFEDIDKMLDQIIKK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KNV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21442 for 1817 contacts (-11.8/contact) +
2D Compatibility (PS) -26476 + (NN) -443 + (LL) 2292
1D Compatibility (HY) -9600 + (ID) 1500
Total energy: -57169.0 ( -31.46 by residue)
QMean score : 0.000
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