Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GEGVSYSDGHFLTKSGGVINFRKTRVTSITITILGNYGLRVVNGELQNTPLTFKGADFKSSTLKDELLIPLEGA----VQLNTAPST--ALCIFITTDHVYRELC--MMQFLTDVDKTPFLVVLRSESKHETIQYMHIVTVHP-FLSLTA-
2HFT Chain:? ((1-106))
---------------------------------------SGTTNTVAAYNLTWKSTNFK-TILEWE---PKPVNQVYTVQISTKSGDWKSKCFYTT-----DTECDLTDEIVKDVKQT-YLARVFSYPAGNVESTEPLYENSPEFTPYLET
General information:
TITO was launched using:
RESULT:
Template:
2HFT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29200 for 565 contacts (-51.7/contact) +
2D Compatibility (PS) -9294 + (NN) 4859 + (LL) 2244
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -34841.0 ( -61.67 by residue)
QMean score : 0.097
(partial model without unconserved sides chains):
PDB file :
Tito_2HFT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HFT-query.scw
PDB file :
Tito_Scwrl_2HFT.pdb
: