Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SNINKAKVASVESDYSSIKSAALSYYSDTNKIPVTPDGQTGLNVLETYMESLPDKADIGGEYKLIKV-----GNKLVLQIGKDGEGVTLTEAQSAKLLSDIGKDKIYTGVTGDNFGEQLKDTTKIDNKALYIVLIDNTVMDSTK
1T92 Chain:A ((2-109))
GNKEKADRQKVVSDLVALEGALDMYKLDNSRYPTTEQG---LQALVSAPSAEPHARNYPEGGYIRRLPQDPWGSDYQLLSPGQHGQVDIFS------LGPDGVPESNDDIGNWTIGF---------------------------
General information:
TITO was launched using:
RESULT:
Template:
1T92.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17155 for 653 contacts (-26.3/contact) +
2D Compatibility (PS) -11175 + (NN) -5610 + (LL) 2680
1D Compatibility (HY) -400 + (ID) 1050
Total energy: -32710.0 ( -50.09 by residue)
QMean score : 0.261
(partial model without unconserved sides chains):
PDB file :
Tito_1T92.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T92-query.scw
PDB file :
Tito_Scwrl_1T92.pdb
: