Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | GALTAQGASFFTAAPLSYNTGNSTISLDYRSPQLRVSGG---ALALTSPVFVY-------QTPFNTPMRLRNGTYNEYADAHIQMVRFGTTVLFNIDVTGETNATGTQTWELQFDGTLGSCLTGRMQVMGGTGEELDVTPTFILPTSDKSVYKQGFMPIVCSENGEFKQSTYCSYALTYRLGNFYITLKSTTSGCKPIFQ---MSFMYESQIGIV |
| 1KKE Chain:A ((250-455)) | ----EQSYVASAVTPLRLNSSTKVLDMLIDSSTLEINSSGQLTVRSTSPNLRYPIADVSGGIGMSPNYRFRQSMWIGIVSYSGSGLNWRVQVNSDIFIVDDYIHICLPAFDGF---SIADGGDLSLNFVTGLLPPLLTGDTEPAFHNDVVTYGAQTVAIGLSSGGAPQYMSKNLWVEQWQDGVLRLRVEGGGSITHSNSKWPAMTVSYPRSFT-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KKE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -53624 for 1248 contacts (-43.0/contact) +
2D Compatibility (PS) -21121 + (NN) -9395 + (LL) 480
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -88960.0 ( -71.28 by residue)
QMean score : 0.150
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