Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPPQISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFDFAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALAAQGDNVVINLASDEYFKSVKPK----KLNAEIIK--PVFLDEKNGKFKIISFYAKKA-RGLMSRFIIENRLTKPEQLTGFNSEGYFFDE-----DSSSNGELVFKRYEQR |
1JYO Chain:A ((1-130)) | --------------------------------------------------------------------------------------------------------------------------------------------LQAHQDIIANIGEKLGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEGTLAYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5519 for 691 contacts (8.0/contact) +
2D Compatibility (PS) -11692 + (NN) 5748 + (LL) 9880
1D Compatibility (HY) -6000 + (ID) 1100
Total energy: 2355.0 ( 3.41 by residue)
QMean score : 0.043
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