Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKMRVYSLLFMMLFALSIGANAQVKFFTDVNSKQIKTLQVKVAGELISEPYIALGGEEQIEINFDGLGSGYTRYAYNVVHCNADWTQSQLSPIEYMNGFQGTTIDDFANSIGTTTQYSNYRLLLPNDDVQFKVSGNYAIQVYNEDTPDQIIFTACFSVVEPVVNISASVSGNTDIDTNQSHQQVSFNINNKNFPITYPQTDLKIFVYQDNRRDNAVTDLQPMSILENQISYTYNRNLIFPAGNEYRRMEFLSNKYNGMHVENISFHNPYYNVELMTDYRRDKGTYQYDQDQDGRFFIRCSDCNDPDTEADYYIVHFTLACDPL-PDGSVYLNGE---LFNNVLDEKSKMG--YNFETKQYEKAVLLKQGS-YNYQYLFVPTGSSVGQTGPIEGNYYQTQNEYSIYVYYRPMGARYDRLIGVTTVRNEMQVF |
| 1VEM Chain:A ((419-491)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVMQTIVVKNVPTTIGDTVYITGNRAELGSWDTKQY-PIQLYYDSHSNDWRGNVVLPAERNIEFKAFIKSKDGT----------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1VEM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -25115 for 356 contacts (-70.5/contact) +
2D Compatibility (PS) -7163 + (NN) -1576 + (LL) 20972
1D Compatibility (HY) -3200 + (ID) 400
Total energy: -16482.0 ( -46.30 by residue)
QMean score : 0.075
|
|
|