Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MDLPDIVNMYFDADSCNDTDALSETFAPDAVVED--EGARHQGVVAILRWWVAAKKAASYVAEPLE--STVDGDKALVRAKVSGRFPGSPVTLTYSFTIK---DGRIARLEIQ--------
1EA2 Chain:A ((2-127))
NLPTAQEVQGLMARFIELVDVGDIEAIVQMYADDATVEDPFGQPPIHGREQIAAFYRQG---LKVRACLTGPVRASHNGCGAMPFRVEMVWNGQPCALDVIDVMRFDEHGRIQTMQAYWSEVNLSV
General information:
TITO was launched using:
RESULT:
Template:
1EA2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29146 for 689 contacts (-42.3/contact) +
2D Compatibility (PS) -11169 + (NN) -1744 + (LL) 272
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -46287.0 ( -67.18 by residue)
QMean score : 0.422
(partial model without unconserved sides chains):
PDB file :
Tito_1EA2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EA2-query.scw
PDB file :
Tito_Scwrl_1EA2.pdb
: