Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------MDSLVKIMGSFLALSLIMIFSSCIVNEHVDEGNIKENAVRMMECIVNKD---SEKLFDFYNKDMKDN-----YKDSS--LDEIRQLFEYIDGA-ITSYNYEGKGGGQ------EAKNDGIICYYSC-------HPEFD-------FTTETGQEYTISFSYHYI--WNEHPEYEGINMIQ------ICKDGNWGEKLIIGRNYYKE--------------------------------- |
| 1VB5 Chain:A ((2-275)) | LPERVLEILREMKRERIKGASWLAKKGAEAFLTLAEELDESLLEDAIMELREEVVKVNPSMASLYNLARFIPVTNRRDILKSRALEFLRRMEEAKRELASIGAQLIDDGDVIITHSFSSTVLEIIRTAKE--RKKRFKVILTESSPDYEGLHLARELEFSGIEFEVITDAQMGLFCREASIAIVGADMITKDGYVVNKAGTYLLALACHEN----AIPFYVAAETYKFHPTLKSGDVMLMERDLIRGNVRIRNVLFDVTPWKYVRGIITELGIVIPPRDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VB5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27036 for 916 contacts (-29.5/contact) +
2D Compatibility (PS) -17639 + (NN) -11534 + (LL) 456
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: -58853.0 ( -64.25 by residue)
QMean score : 0.274
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