Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGPVAG-NYVHDFTAN--GTSSSFYTIAGNLSTSKGTATYNGKTLTQCLKMETATSI--------SFTAPSAGKLTLVFAEAAATAKVDGNKVTASNGIITVDLAQGAHTITKADACNLFYMEYAA-----HHHHHH
2JOZ Chain:A ((1-135))
MIMVSGCQQQKEETPFYYGTWDEGRAPGPTDGVKSATVTFTEDEVVETEVMEGRGEVQLPFMAYKVISQSTDGSIEIQYLGPYYPLKSTLKR--GENGTLIWEQNGQRKTMTRIESKTGREEKDEKSKSLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2JOZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11241 for 631 contacts (-17.8/contact) +
2D Compatibility (PS) -12536 + (NN) 709 + (LL) 244
1D Compatibility (HY) 2400 + (ID) 1100
Total energy: -21524.0 ( -34.11 by residue)
QMean score : 0.000
(partial model without unconserved sides chains):
PDB file :
Tito_2JOZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JOZ-query.scw
PDB file :
Tito_Scwrl_2JOZ.pdb
: