Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATTRSLDHAKAEAELAINIKKATSP-EETAPKRKHVRS------CI----VYTWDHKSSLSFWAGLKVQPILADEVQTFKALITIHKVLQEGHPV------TLREAMANRGWIDSLSRGMMGEGVRGYGPL---IREYVHFLLAKLSF----HKQHPEFNGTF---EYEEYISLKAIHDPNEGYETITDL------MTLQDKIDQFQKLIFSHFR-HIGNNECRISALVPLVAES--------------YGIYKFITSMLRAMHSSTGDNEALE-------PLRQRYDAQHYRLVKF-----YYECSNLRYLTSLITIPKL-- |
| 2VIU Chain:A ((9-328)) | --STATLCLGHHAVPNGTLVKTITDDQIEVTNATELVQSSSTGKICNNPHRILDGIDCTLIDALLGDPHCDVFQNE--TWDLFVERSKAFSNCYPYDVPDYASLRSLVASSGTLEFITEGFTWTGVIQNGGSNACKRGPGSGFFSRLNWLTKSGSTYPVLNVTMPNNDNFDKLYIWGIHHPSTNQEQTSLYVQASGRVTVSTRRSQQTIIPNIGSRPWVRGLSSRISIYWTIVKPGDVLVINSNGNLIAPRGYFKMRTGKSSIMRSDAPIDTCISECITPNGSIPNDKPFQNVNKITYGACPKYVKQNTLKLATGMRNVPEKQT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VIU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55065 for 1627 contacts (-33.8/contact) +
2D Compatibility (PS) -26077 + (NN) 8054 + (LL) 664
1D Compatibility (HY) -7200 + (ID) 2350
Total energy: -81974.0 ( -50.38 by residue)
QMean score : 0.058
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