Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRAPLKRSRILHMALTGASDPSAEAEANGEKPF------LLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVT-----FYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLL-SYLLLKQTTSF--YALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQL-GSAHFWGMMTLGGLFGFA--IGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKSAMGV- |
| 2IU8 Chain:A ((21-366)) | MSQSTYSLEQLADF-LKVEFQGNGATLLSGVEEIEEAKTAHITFLDNEKYAKHLKSSEAGAIIISRTQFQKYRDLNKNFLITSESPSLVFQKCLELFITPVDSGFPGIHPTAVIHPTAIIEDHV--CIEPYAVVCQHAHVGSACHI----GSGSVIGAYSTVGEHSYIHPRVVIRERVSIGKRVIIQPGAVIGSCGFGYVTSA-FGQHKHLKHLGKVIIEDDVEIGANTTIDRGRFKHSVVREGSKIDN----LVQIAHQVEVGQHSMIVAQAGIAGSTKIGNHVIIGGQAGITGHICIADHVIMMAQTGVTKSITSPGIYGGAPA------------------------RPYQEIHRQVAKVRNLPRLEERIAALEKLVQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2IU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -330765 for 2553 contacts (-129.6/contact) +
2D Compatibility (PS) -34017 + (NN) 4009 + (LL) 3192
1D Compatibility (HY) -2000 + (ID) 1900
Total energy: -361481.0 ( -141.59 by residue)
QMean score : 0.116
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