Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------MAAATAAAALAAA------------------DPPPAMPQAAGAGGPTTRRDFYWL----------RSFLAGGIAGCCAKTTVAPLDRVKVLLQAHNHHYKHL-----------GVFSALRAVPQKEGFLGLYKGNGAMMIRIFPYGAIQFMAFEHYKTLITTKLGISGHV-HRLMAGSMAGMTAVICTYPLD-MVRVRLAFQVKGEHSYTGIIHAFKTIYAKEGGFFGFYRGLMPTILGMAPYAGVSFFTFGTLKSVGLSHAPTLLGRPSSDNPNVLVLKTHVNLLCGGVAGAIAQTISYPFDVTRRRM------QLGTVLPEFEKCLTMRDTMKYVYGHHGIRKGLYRGLSLNYIRCIPSQAVAFTTYELMKQFFHLN |
4WID Chain:A ((10-362)) | KDMALQHAVDLLEKMLADEEKLTEFNLGDPLFESANDDPIKTLEEIIQEGDDVVGAHQLVVTQIKLRVQRNRRLADEIIREQLTDIRKVFSDKFEKLEQGIQNSYLLLDKLKTPFQDMRCLFEVANEQFNDTPVPPQYKEFMVCLKQIVQYAVNS-SSLEKFVMLITKKDDIKDRVTYTCMKYLLMAMQGTGGPKAINNEEHAKLFFQLSNYDDLTDANHDGLELIKKLDKEQKEVAFHVNNFTHLVTTLGMALYKEGHQKNDEAMLGM---------HTPITMLSDQVRVLILYLIDEIVHAIHTNSNQSNDELIDGLKPKVRIVINEFHATLMMGIDKMKFY-------------SLNELREIVNDKI--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WID.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164963 for 1939 contacts (-85.1/contact) +
2D Compatibility (PS) -30013 + (NN) 1101 + (LL) 2052
1D Compatibility (HY) -9200 + (ID) 2600
Total energy: -203623.0 ( -105.01 by residue)
QMean score : 0.219
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