Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------------------------------------------------------------------MGAGGPRRGEGPPDGGWGWVVLGACFVVTGFAYGFP---KAVSVFFRALMRDFDAGYSDTAWVSSIMLAMLYGTGPV---SSILVTR-----FGCRPVMLAGGLLASAGMILASFATRLLELY----------------LTAGVLTGLGLALNFQPSLIMLGLYFERRRPLANGLAAAGSPVFLSALSPLGQQLLERFGWRGGFLLLGGL--------------------LLHCCACG-------AVMRPPPGPGPRPRRDSAGDRAGDAPGEAEADGAGLQ--LREASPRVRPRRRLL--------------DLAVCTDRAFAVYAVTKFLMALGLFVPAILLVNYAKDA------GVPDTDAAFLLSIVGFVDIVARPACGALAGLARLRPHVPYLFS-------LALLANGLT--DLSSARARSYGALVAFCVAFGLSYGMVGALQFE---------------VLMAAVGAPRFP----------------SALGLVLLVEAAAVLIGPPSAGRLVDVLKNYEIIFYLAGSEVALAGVFMAVATNC-------CLRCAKAAPSGPGTEGGASDTEDAEAEGDSEPLPVVAEEPGN---------LEALEVLSARGEPTEPEIEARPRLAAESV-- |
| 3P5P Chain:A ((5-756)) | TYQERADELVVKIKDMFNALGDGDISPSAYDTAWVARLATISSDGSEKPRFPQALNWVFNNQLQDGSWGIESHFSLCDRLLNTTNSVIALSVWKTGHSQVQQGAEFIAENLRLLNEEDELSPDFQIIFPALLQKAKALGINLPYDLPFIKYLSTTREARLTDVSAAADNIPANMLNALEGLEEVIDWNKIMRFQSKDGSFLSSPASTACVLMNTGDEKCFTFLNNLLDKFGGCVPCMYSIDLLERLSLVDNIEHLGIGRHFKQEIKGALDYVYRHWSERGIGWGRDSLVPDLNTTALGLRTLRMHGYNVSSDVLNNFKDENGRFFSSAGQTHVELRSVVNLFRASDLAFPDERAMDDARKFAEPYLREALATKISTNTKLFKEIEYVVEYPWHMSIPRLEARSYIDSYDDNYVWQRKTLYRMPSLSNSKCLELAKLDFNIVQSLHQEELKLLTRWWKESGMADINFTRHRVAEVYFSSATFEPEYSATRIAFTKIGCLQVLFDDMADIFATLDELKSFTEGVKRWDTSLLHEIPECMQTCFKVWFKLMEEVNNDVVKVQGRDMLAHIRKPWELYFNCYVQEREWLEAGYIPTFEEYLKTYAISVGLGPCTLQPILLMGELVKDDVVEKVHYPSNMFELVSLSWRLTNDTKTYQAEKARGQQASGIACYMKDNPGATEEDAIKHICRVVDRALKEASFEYFKPSNDIPMGCKSFIFNLRLCVQIFYKFNEEIKDYIRKVYIDPIQV |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P5P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241746 for 3538 contacts (-68.3/contact) +
2D Compatibility (PS) -52902 + (NN) -17862 + (LL) 0
1D Compatibility (HY) -8400 + (ID) 3050
Total energy: -323960.0 ( -91.57 by residue)
QMean score : 0.188
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