Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAFNDLLQQVGGVGRFQQIQVTLVVLPLLLMASHNTLQNFTAAIPTHHCRPPADANLSKNGGLEVWLPRDRQGQPESCLRFTSPQWGLPFLNGTEANGTGATEPCTDGWIYDNSTFPSTIVTEWDLVCSHRALRQLAQSLYMVGVLLGAMVFGYLADRLGRRKVLILNYLQTAVSGTCAAFAPNFPIYCAFRLLSGMALAGISLNCMTLNVEWMPIHTRACVGTLIGYVYSLGQFLLAGVAYAV-----------PHWRHLQLLVSAPFFAFFIYSWFFIESARWHSSSGRLDLTLRALQRVARINGKREEGAKLSMEVLRASLQKELTMGKGQASAMELLRCPTLRHLFLCLSMLWFATSFAYYGLVMDLQGFGVSIYLIQVI-FGAVDLPAKLVGFLVINSLGRRPAQMAALLLAGICILLNGVIPQDQSIVRTSLAVLGKGCLAASFNC---IFLYTGELYPTMIRQTGMGMGSTMARVGSIVS----PLVS----MTAELYPSMPLFIYGAVPVAASAVTV-LLPETLGQPLPDTVQDLESRWAPTQKEAGIYPRKGKQTRQQQEHQKYMVPLQASAQEKNGL |
| 4QIQ Chain:A ((7-470)) | -------SYIFSITLVATLGGLLFGYDTAVISG--TVESLNTVFV-------APQNLS-------------ESAANSLLGFCVASALIGCIIGGALGGYCSNRFG-----------------------RRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVP--------------VYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMT----------------LATQAVQEIKHSLDRLLMFGVGVIVIGVMLSIFQQFVG----INVVLYYAPEVFKT-----------LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTL--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -302420 for 3338 contacts (-90.6/contact) +
2D Compatibility (PS) -42032 + (NN) -1041 + (LL) 9196
1D Compatibility (HY) -27200 + (ID) 3900
Total energy: -367397.0 ( -110.07 by residue)
QMean score : 0.216
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