Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MAFSKLLEQAGGVGLFQTLQVLTFILPCLMIPSQMLLENFSAAIPGHRCWTHMLDNGSAVSTNMTPKALLTISIPPGPNQGPHQCRRFRQPQWQLLDPNATATSWSEADTEPCVDGWVYDRSVFTSTIVAKWDLVCSSQGLKPLSQSIFMSGILVGSFIWGLLSYRFGRKPMLSWCCLQLAVAGTSTIFAPTFVIYCGLRFVAAFGMAGIFLSSLTLMVEWTTTSRRAVTMTVVGCAFSAGQAALGGLAFALRD-----------WRTLQLAASVPFFAISLISWWLPESARWLIIKGKPDQALQELRKVARINGHKEAKNLTIEVLMSSVKEEVASAKEPRSVLDLFCVPVLRWRSCAMLVVNFSLLISYYGLVFDLQSLGRDIFLLQALFGAVDFLGRATTALLL--SFLGRRTIQAGSQAMA-GLAILANMLVPQDLQTLRVVFAVLGKGCFGISL-TCLTIYKAELFPTPVRMTADGILHTVGRLGAMMGPLILMSRQALPLLPPL--------LYGVISIASSLVVLFFLPETQGLPLPDTIQDLESQKSTAAQGNRQEAVTVESTSL |
| 4QIQ Chain:A ((7-470)) | SYIFSITLVATLGGLLFGYDTAVISGT----------VESLNTVFVAPQNLSESAANSLLGFCV----ASALIGCIIGGALGGYCSNRFGR-----------------------------------------------RDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVP-------VYLAG----YVPEFVIY---RIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDASWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLM--TLATQAVQEIKHSLDRLLMFGVGVIVIGVMLSIFQQFVG----------------------------INVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTL------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QIQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -258862 for 3367 contacts (-76.9/contact) +
2D Compatibility (PS) -41798 + (NN) -391 + (LL) 9640
1D Compatibility (HY) -26400 + (ID) 4500
Total energy: -322311.0 ( -95.73 by residue)
QMean score : 0.242
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