Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MAFSELLDLVGGLGRFQVLQTMA-----LMVSIMWL--CTQSMLENFSAAVPSHRCWAPLLD-NSTAQASILGSLSPEALLAISIPPGPNQRPHQCRRFRQPQWQLLDPNATATSWSEADTEPCVDGWVYDRSIFTSTIVAKWNLVCDSHALK-----PMAQSIYLAGILVGAAACGPASDRFGRRLVLTW-------SYLQMAVM--GTAAAFAPAFPVYCLFRFLLAFA-----------VAGVMMNTGTLLMEWTAARARPLVMTLNSLGFSFGHGLTAAVAYGVRDWTLLQLVVSVPFFLCFLYSWWLAESARWLLTTGRLDWGLQELWRVAAINGKGAVQDTLTPEVLLSAMREELSMGQPPASLGTLLRMPGLRFRTCISTL----CWFAFGFTFFGLAL----------------DLQALGSNIFLLQ--------------MFIGVVDIPAKMGALLLLSHLGRRPTLAASLLLAGLCILANTLVPHEMGALRSALAVLGLGGVGAAFTCITIYSSELFPTVLRMTA---VGLGQMAARGGAILGPLVRLLGVHGPWL-------PLLVYGTVPV-----------LSGLAALLLPETQSLPLPDTIQDVQNQAVKKA----------------------THGTLGNSVLKSTQF----------------------------------------------------- |
| 3WOL Chain:A ((1-696)) | GEGMWVPQQLPEIAGPLKKAGLKLSPQQISDLTGDPMGAVVALGGCTASFVSPNGLVVTNHHCAYGAIQLNSTAENNLIKNGFNAPTTADEVSAGPNARVFVLDEITDVTKDAKAAIAAAGDDALARTKALEA---FEKKLIADC-EAEAGFRCRLYSFSGGNTYRLFKNLEIKDVRLAYAPPGSVGKFGGDIDNWMWPRHTGDFAFYRAYVGKDGKPAAFSKDNVPY-QPKHWLKFADQPLGAGDFVMVAGYPGSTNRYALAAEFDNTAQW--TYPTIARHYKNQIAMVEAAGKQNADIQVK--------------YAATMAGWNNTSKNYDGQLEGFKRIDAAGQKLREEAAVLGWLKGQGAKGQPALDAHAKLLDLLEQSKATRDRDLTLALFNNTAMLGSATQLYRLSIEREKPNAERESGYQERDLPAIEGGLKQLERRYVAAMDRQLQEYWLNEYIKLPADQRVAAVDAWLGGND---AAAVKRALDRLAGTKLGSTEERLKWFAA--DRKAFEASNDPAIQYAVAVMPTLLKLEQERKTRAGENLAARPVYLQALADYKKSQGEFVYPDANLSLRITFGNVMGYAPKDGMEYTPFTTLEGVVAKETGQDPF-DSPKALLDAVAAKRYGGLEDKRIGSVPVNYLSDLDITGGNSGSPVLDAHGKLVGLAFDGNWESVSSNWVFDPKMTRMIAVDGRYLRWIMQEVYPAPQLLKEMNV |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3WOL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -259910 for 3796 contacts (-68.5/contact) +
2D Compatibility (PS) -53862 + (NN) 5677 + (LL) 2868
1D Compatibility (HY) -3200 + (ID) 4950
Total energy: -313377.0 ( -82.55 by residue)
QMean score : 0.072
|
|
|