Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEQEARVLRAAGGFGRARRLLASASWVPCIVLGLVLSSEELLTAQPAPHCRPDPTLLPPALRALRGPALLDAAIPRLGPTRAPAEALGVLSPSYLAPLTRAPRPSSWASCSGAAAGPTWNLVCGDGWKVPLEQVSHLLGWLLGCVILGAGCDRFGRRAVFVASLVLTTGLGASEALAASFPTLLVLRLLHGGTLAGALLALYLARLELCDPPHRLAFSMGAGLFSVVGTLLLPGLAALVQDWRLLQGLGALMSGLLLLFWGFPALFPESPCWLLATGQVARARKILW-----RFAEASGVGPGDSSLEENSLATA-TELTMLSARSPQPRYHSPLGLLRTRVTWRNGLILGFSSLVGGGIRASFRRSLAPQVPTFYLPYFLEAGLEAAALVFLLLTADCCGRRPVLLLGTMVTGLASLLLLAGAQYLPGWTVLFL----SVLGLLASRAVSALSSLFAA-EVFPTVIRGAGLGLVLGAGFLGQAAGPLDTLHGRQGFFLQQVVFASLAVLALLCVLLLPESRSRGLPQSLQDADRLRRSPLLRGRPRQDHLPLLPPSNSYWAGHTPEQH |
| 2GOP Chain:A ((10-347)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TFAKFAYLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARRFIENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK----NIRSLEWNEDSRKLLIVGFKRREVPAWEKTTFWIFDTESEEVIEEFEKPRF--------SSGIWHRDKIVVNVP----------HREIIPQYFKFWDIYIWEDGKEEKMFEKVSFYAVDSDGERILLYGK-----------PEKKYMSEHNKLYIYDGKEVMGILDEVDRGVGQAKIKDGKVYFTLFEEGSVNLYIWDGEIKPIA---KGRHWIMGFDVDEI------------VVYLKETATR--LRELFTWDGEEKQLTDYNDPIFAKL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GOP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225971 for 2356 contacts (-95.9/contact) +
2D Compatibility (PS) -31690 + (NN) 7463 + (LL) 15112
1D Compatibility (HY) -9600 + (ID) 2800
Total energy: -247486.0 ( -105.04 by residue)
QMean score : 0.078
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