Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGVCQRTRAPWKEKSQLERAALGFRKGGSGMFASGWNQTVPIEEAGSMAALLLLPLLLLLPLLLLKLHLWPQLRWLPADLAFAVRALCCKRALRARALAAAAADPEGPEGGCSLAWRLAELAQQRAAHTFLIHGSRRFSYSEAERESNRAARAFLRALGWDWGPDGGDSGEGSAGEGERAAPGAGDAAAGSGAEFAGGDGAARGGGAAAPLSPGATVALLLPAGPEFLWLWFGLAKAGLRTAFVP--TALRRGPLLHCLRSCGARALVLAPEFLESLEPDLPALRAMGLHLWAAGPGTHPAGISDLLAEVSAEVDGPVPGYLSSPQSITDTCLYIFTSGTTGLPKAARISHLKILQCQGFYQLCGVHQEDVIYLALPLYHMSGSLLGIVGCMGIGATVVL--KSKFSAGQFWEDCQQHRVTVFQYIGELCRYLVNQPPSKAERGHKVRLAVGSGLRPDTWERFVRRFGPLQVLETYGLTEGNVATINYTGQRGAVGRASWLYKHIFPFSLIRYDVTTGEPIRDPQGHCM------ATSPGEPGLLVAPVSQQSPFLGYAGGPELAQGKLLKDVFR-PGDVFFNTGDLLVCDDQGFLRFHDRTGDTFRWKGENVATTEVAEVFEALDFLQEVNVYGVTVPGHEGRAGMAALVLRPPHALDLMQLYTHVSENLPPYARPRFLRLQESLATTETFKQQKVRMANEGFDPSTLSDPLYVLDQAVGAYL----------PLTTARYSALLAGNLRI--------------------------------- |
4DG9 Chain:A ((18-604)) | -----NSLLDLYAHP-------------------------------------------------------------------------------------------------TVVARFSEMAALHPHREAIRDRFGSVDYRQLLDSAEQLSDYLLEH----------------------------------------------------YPQPGVCLGVYGEYSRESITCLLAILLSG--HHYLYIDLKQPAAWNAELCRQVDCRLILDC--------------------------STTPTPANGLPCVPVRHLPAAPASVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLGQSFLAFAPQMRFLVNSP-LSFDAATLEIWGALLNGGCCVLNDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLDPDCL-GGLRQLLTGGDILSVPHVRRALLRHPRLHLVNGYGPTENTTFTCCHV---------------VTDDDLEEDDIPIGKAIAGTAVLLLDEHGQEIAEPDRAGEIV--AFGAGLAQGYRNDAARTRASFVELPYRGRLLRAYRTGDRARYDEQGRLRFIGRGDGQVKLNGYRLDLPALEQRFRRQPGILDCALLVR--ERNGVKQLLCAWTGKAD------ASPQALLRQLPTWQRPHACVRVEALPLTAHGKLDRAALLRRLELDPDQRGCAQLWSELLGCEVGADFFLCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLLRSHGLAPERLLE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4DG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -279667 for 4467 contacts (-62.6/contact) +
2D Compatibility (PS) -55560 + (NN) -19514 + (LL) 11356
1D Compatibility (HY) -11600 + (ID) 4200
Total energy: -359185.0 ( -80.41 by residue)
QMean score : 0.379
|
|
|