Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------MEAARTAV-----LRVKRKRSAEPAEALVLACKRLRSD---AVESAAQKTSEGLERAAENNVFHLVATVCSQEEPVQPLLREVLRPSRDSQQRVRRNLRASAREVRQEGRYRVLSSRRSLGTTSSGQESEYTPGNPEAAGNSGFQLLDLVHEEGEPEAASAGSCKTSDPDVILCNSVEL------------IRERLTVSEDGPGVRRQEEQKHDDYVYDIYYLETATPGWIENIL-----SVQPYSQEWELVNDDQEPEDIYDDEDDENSENNWRNEYPEEESSDGDEDSRGSADYNSLSEEERGSSRQRMWSKYPLDVQKEFGYDSPHDLDSD |
| 1K6D Chain:A ((1-219)) | MKTKLMTLQDA-TGFFRDGMTIMVGGFMGIGTPSRLVEALLESGVRDLTLIANDTAFVDTGIGPLIVNGRVRKVIASHIG------TNPETGRRMISGEMDVVLVPQGTLIEQIRCGGAGLGGFLTPTGVGTVEG--------------------KQTLTLD---GKTWLLERPLRADLALIRAHRCDTLGNLTYQLSARNFNPLIALAADITLVEPDELVETGEL--QPDHIVTPGAVIDHIIVSQES--------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1K6D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 31521 for 1431 contacts (22.0/contact) +
2D Compatibility (PS) -19084 + (NN) -3281 + (LL) 3392
1D Compatibility (HY) 4400 + (ID) 1000
Total energy: 15948.0 ( 11.14 by residue)
QMean score : 0.200
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