Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPAPRAPRALAAAAPASGKAKLTHPGKAILAGGLAGGIEICITFPTEYVKTQLQLDERSHPPRYRGIGDCVRQTVRSHGVLGLYRGLSSLLYGSIP-KAAVRFGMFEFLSNHMRDAQGRLDSTRGL-LCGLGAGV------AEAVV-VVCPMETIKVKFIHDQTSPNPKYRGFFHGVREIVRE---------QGLKGTYQGLTA------------TVLKQGSNQ--AIRFFVMTSLRNWYRG-DNPNKPMNPLITGVFGAIAGAASVFGN-TPLDV-IKTRMQGLEAHKYRNTWDCGLQILKKEGLKAFYKGTVPRLGRVCLDVAIVFVIYDEVVKLLNKVWKTD--- |
| 2P7N Chain:A ((47-392)) | -PALAAARAKADELGQAAREVRASVERQTAYETRLAAQRSAAAFSGGEPPARREAPGAELDE---------ARNAQTVSARLFEGNLKGVAQSGHAMSAEQKQALQSGLDDVFADAPPQARSAGAPMLYSANAAAGQGMADSDLWDMISDQIGKIKDNYLGVYENVVGQYTDFYKAFSDILSQMANWIKLNVDALKAALEKLKKDFSLGDNLDNKKAVLFPAQSKDGGIQGGSESDARKWAKEMGLPDAP-PPGFSCVQKAADGNWVVVVDMTPIDTMIR-DVGALGSGT--LELDNAKFQAWQSGFKAQEENLKNTLQTLTQKYSNANSLFDNLVKVLSSTISSCLET |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P7N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36878 for 2108 contacts (-17.5/contact) +
2D Compatibility (PS) -29545 + (NN) -2532 + (LL) 984
1D Compatibility (HY) 18400 + (ID) 1250
Total energy: -50821.0 ( -24.11 by residue)
QMean score : 0.062
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